Q: No colony or less colony
A:
1. Primer design error: Confirm that the primer sequences contain a 15 bp homologous sequence identical to the insertion region of the vector.
2. Poor purity of the insert fragment: Purify both the vector and insert fragment using gel extraction, and proceed with ligation only after confirming a single band on agarose gel electrophoresis of the gel-extracted products.
3. Low transformation efficiency: Use freshly prepared competent cells or highly efficient commercial competent cells.
4. Poor ratio of linearized vector or insert fragment within the reaction system: Calculate the amounts of each component according to the manual, and assess sample quality and concentration using agarose gel electrophoresis.
Q: High false-positive cloning rate
A:
1. Incomplete linearization of cloning vector may lead to higher false positives. It is recommended to increase the amount of restriction enzyme used, extend the reaction time, and purify the digested products using gel extraction.
2. Contamination with plasmids carrying the same resistance gene. Pay attention to the cleanliness of the experimental environment and eliminate background plasmids.
3. Loss of antibiotic resistance in transformation plates. It is recommended to use freshly prepared plates containing the correct and appropriate concentration of antibiotics.
Q: Incorrect insert in clones
A:
Optimize the PCR system to improve specificity and use gel extraction to purify PCR products. High-quality products provide reliable support for experiments. You deserve to have TransGen seamless cloning products!